logml.report.notebooks.rnaseq_gsa

Classes

RNASeqDifferentialExpressionNotebook(cfg, ...)	Notebook for 'rnaseq_differential_expression' analysis item artifacts displaying.
RNASeqEnrichmentAnalysisNotebook(cfg, ...[, ...])	Notebook for 'rnaseq_enrichment_analysis' analysis item artifacts displaying.

class logml.report.notebooks.rnaseq_gsa.RNASeqDifferentialExpressionNotebook(cfg: GlobalConfig, global_params: Dict, output_structure: logml.report.ReportOutputStructure, logger: logging.Logger = None, file_ext: str = '.ipynb')

Bases: logml.report.notebooks.base.BaseBKNotebook

Notebook for ‘rnaseq_differential_expression’ analysis item artifacts displaying.

ALIAS: str = 'rnaseq_differential_expression'

VIEWS: List[str] = ['rnaseq_differential_expression']

SCOPE: List[logml.report.notebooks.base.BKNotebookScopes] = [<BKNotebookScopes.GLOBAL: 'global'>, <BKNotebookScopes.SETUP: 'setup'>]

class logml.report.notebooks.rnaseq_gsa.RNASeqEnrichmentAnalysisNotebook(cfg: GlobalConfig, global_params: Dict, output_structure: logml.report.ReportOutputStructure, logger: logging.Logger = None, file_ext: str = '.ipynb')

Bases: logml.report.notebooks.base.BaseBKNotebook

Notebook for ‘rnaseq_enrichment_analysis’ analysis item artifacts displaying.

ALIAS: str = 'rnaseq_enrichment_analysis'

VIEWS: List[str] = ['rnaseq_enrichment_analysis']

SCOPE: List[logml.report.notebooks.base.BKNotebookScopes] = [<BKNotebookScopes.GLOBAL: 'global'>, <BKNotebookScopes.SETUP: 'setup'>]